When the team raid the hacker's apartment, Reade smashes the door open with a battering ram, which breaks the door frame and possibly the lock. When we see the door again later, it is undamaged and can be locked normally.
The tracking software is at risk of being released as open source, and described as being free software. In fact the Open Source Initiative has gone to great pains to explain that open source does not mean free. Open source is accessible, can be modified or forked, but it specifically does not mean without cost. Anyone familiar with the term should understand the difference.
When the group finds the truck and Jane is firing her pistol the slide isn't moving with each shot, showing the gun was never actually being fired.