- The Famicom version of this game has some changes made from the game, including.
- The Title Screen showing Rockman 3 with a picture of Mega Man.
- The select menu level now has Rockman showing in the background picture.
- The characters uses Japanese symbols instead of English words in the game script, this isn't a problem for English speakers since you're fighting enemies most of the time anyway.
- The room near the end of Wily stage 1 has a broad platform centered in the room for 2 Weapon Energy capsules which was changed to be near the panel door.
- the bolt and nut enemy in this room in Top Man's appears as Mega Man falls into the room.
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