[PART I- No Man Is an Island] Kuzco's habit to make every presentation about himself is scolded by teacher Moleguaco and, worse, Malina, as being selfish. Yzma tells Krink she's sick of elaborate methods to dispose of Kuzco and Malina, this time they simply get shipped off to an uninhabited island. There the native monkeys seem to worship them, but too late they discover that they are there only as sacrifices for their 'Ape-like' god. As Kronk left her a message he decided to spare Kuzco, Yzma drags him along to follow the youngsters, unsuspecting about the humongous ...
[I- Air Kuzco] Kuzco is envious of Kronk's popularity as the school's sports hero, so he insists on being included in an imperial ballgame duel against Mexico's Emperor's school. Alas his egotism ends up chasing all the other Kuco Academy team members. [II- Kronkenitza] When a school assignment to research Kronk's own family tree makes him realize he's different, Kuzco makes fun of him. Kronk feels unappreciated, and Keven Yzma replaces him with a clone of herself, so he returns to his native village, Kronkenitza. But he discovers since they're all like him there, ...
[I- Come Fly with Me] Ar Malina's blossom ball (coming out party), Kuzco ruins everything, as egocentrically as usual. After drinking an Yzma-elixir turns him into a nearly swatted fly, he uses a time-watch after overhearing she could really like him if only he wasn't so- Kuzco. Next time he overdoes putting the focus on her, his style. Third time, right time? [II- Project Poncho] Mr. Moleguaco makes the annual poncho festival contest, Malina's dream ambition, a school project. Kuzco is prepared to cheat because the prize is a Lima trip for two. Guaca allows him to ...
[I- Citizen Kronk] The Kuzco Academy elects a deputy for student president Melina. Yzma hopes to ruin Kuzco's chances by transforming Kronk into an evil double. However Kronk's true nature easily wins out from Kuzko, and yet... [II- The Pajama Llama Dilemma] Kuzco accidentally finds the ticket for a picnic with Kronk's cartoon hero Pajama Llama. He makes Kronk slave for it as devoted butler. Alas, the validity expires. Melina and Pascha work on Kuzco's conscience.
[I- Yzma Be Gone] Yzma's endless transformation potion plans get on Kuzco's nerves. He takes Guaca's suggestion and dubious help to solve the problem at the root, the secret lab. Despite Kronk's efforts do save the context, it all gets used in a magic duel variation. [II- Last Ditch Effort] Kuzco is one ditched class away from automatic expulsion. Guaca and Malina ditch for the first time to get him back before the school-day's end. Guaca spills the beans to Yzma, so she and Kronk try everything to prevent Kuzco's timely return.
[I- The Good, the Bad and the Kronk] Kronk is tired of his angelic and diabolic conscience rivals are bickering in his ear, so he sends both on a holiday. That makes him unable to decide anything at all. Then Yzma decides to reactivate only the devil, so as to turn him in a ruthless Kroninator she can turn on Kuzco. [II- Mud] Kuzco, Kronk, Guaca and Malina get lost in the jungle. Despite Kuzco's superstitious fear for the spooky-looking place, they seek shelter inside the mysterious abandoned diner Mudka's #13. There weird things happen, but are those good or bad?
[I- Auction Action] Kuzco expected everyone would bid on him at the charity bachelor auction, especially Malina. Instead she bids on Kronk, who suggests she wants to make him jealous. So he hands Mudka waitress Yatka his credit card. They end up at the same expensive restaurant, paying no attention to their dates, with painful consequences. [II- The Astonishing Kuzco] Yzama planned to destroy Kuco by monster laser, but instead it gives him super-powers. Everybody scolds his refusal to use them for good, but when Yzma uses it on herself they agree to help fight her.
During a school museum visit, Kronk's sneezing and Kuzco's dangerous clumsy mischief uncover an ancient inscription. It suggests his family isn't the real dynasty. Worse, that's Guaca's, so he is enthroned, and proves a horrible good pupil of Kuzco's bad example. Yzma hopes to rule trough him or poison him, but fails. The last hope is a prophecy about a lost magical chalice which can reveal the true emperor.
[I - Malina's Big Break] Kuzco tries to help Malina relax when she becomes stressed about her interview for a magazine internship. [II - Hotel Kuzco] Kuzco moves back to the palace, but Yzma has placed traps near all the mirrors.
[I-Father O'Mine] Kuzco is eager to believe a man claiming to be his father, the previous emperor, who has been missing for years after going on a journey and presumed dead. He even dismisses Pacha's warning the impostor is a wanted criminal, until his roar betrays it's indeed Thundercall. Kuzco teams up with Yzma, but the impostor is already in the throne room for his coronation. [II-Everyone Loves Kuzco] Yzma hopes to make Kuzco neglect his studies completely and fail by having Kronk trick him into eating turkey spiced with an elixir making him as irresistibly ...
[I- Puff Piece] When Molegucao gives as assignment to start a business to the students, lazybones Kuzco teams up with Kronk, who bakes his spinach puffs. Kuzco ambitiously turns the small quality cart into a semi-industrial firm, with dire consequences. [II- Take My Advice] The imperial assessment fires Yzma as Kuzco's official adviser and appoints Obsessia, a maternal type Kuzco finds insufferably meddling. Yzma is also fired as principal and fails in business. Yet she's 'missed'.
[I-Yzbot] Yzma's latest crazy scheme involves going to Hollywood, so she leaves Kronk in charge of Yzmabot, a robot taking her place as principal Amzy. The remote control gets mixed up with another, so Kuzco and Kronk fight for it to make thing most or least usual. [II- The Puma Whisperer] To enter the Kuzco Academy's talent hunt, Kuzco imagines he can scare off puma's after an incident where llama-herd Pacha did the actual scaring. Yzma eagerly pits Kuzco in a stadium event, hoping he'll be eaten alive.
[I- Kronk the Magnificent] When a giant Kuzco statue annoys the Royal record-keeper, enough to doctor the books to popular Kronk's advantage, imperial candidates Kuzko and Yzma have to team up. [II- Kamp Kuzco] As the Kuzco Academy programs a jungle scouting day, Kuzco and Malina captain boys viz. girls teams. Their cocky bravery contest is turned into a real ordeal by Yzma's traps, which prove unsafe even for her.
Groove Remover: Yzma hopes to get rid of Kuzko by making him drink a potion which not only transforms him, but everyone who addresses him into whatever they named as a curse. Overachiever Club: Mr. Moleguaco tries punishing Kuzko bu throwing him in the isolation shack. Realizing lazybones only enjoys that, he makes him join Guaca's overachievers club instead, but it's the nerds there who feel punished, and the people their charity tries to help.
[I- Emperor's New Show] Reacting to the show'w fan mail, alas not entirely praising him personally, Kuzco tries his hand at other genres, such as a cop action show. Yzma considers she may do better destroying Kuzco in another context, so she sends more fan letters to make him start a quiz, a sci-fi series etc. [II- Too Many Malina's] Frustrated by Malina's other interests then Kuzco, he tricks Kronk into using on her a personality extraction machine Yzma ordered. The cahoots end up with a horde of reject Malina's, while even the cuddling Malina Kuzco designed becomes ...
Even in a class quiz solely about himself, Kuzco is beaten abysmally. Yet he has an all-AAs report card, which Pasha rewards with a celebratory family dinner. Guaca declines joining because he switched Kuzco's abysmal report with Chacha's. The conscience crisis proves contagious. [II- Eco Kuzco] Unable to tell what loads of old elixirs do, Yzma decides to dump them. Kronk feels guilty when he find out they polluted the public drinking fountain, against his boyscout pledge, and thus caused many people to be transformed into animals.
After reverse psychology fails to win a date with Malina, Kuzco decides he needs to become a rock star like popular Brock, although he can barely play a bit of kazoo. He tricks the royal record-keeper into financing 'educational' expenses. His concert is a disaster, except for the only spectator. [2- Kuzco's Little Secret] Everyone starts wondering if selfish Kuzco has turned considerate after he falls in love with a chinchilla. But all pets are strictly forbidden at school and in Pasha's home.
At the annual Cornivale family festival, Kuzco fakes a flu to sneak out to Machu Pichu. The only transport available is Taxi's free rickshaw, which proves adventurous but far from comfortable. Meanwhile Yzma poses as a distant relative, so she can intrude Pasha's party and administer a potion to Kuzco, having given Kronk the festival day off. Slowly, the party spirit works some mental transformations.
Kuzco is finally about to graduate, but gets scared when the royal records keeper shows him a task description video about endless duty towards the peasant population. So he attempts to fail his final exams, but multiple choice hazard and Moleguaco's unwillingness to get stuck with him pass. Meanwhile Yzma prepares her coronation and has Kuzco transformed into a chicken. His experience as heroic rooster changes his mind about fitness for emperorship.