The alphas rescue Dr. Rosen's estranged alpha daughter from an assassin. She carries a carefully coded message stolen from Red Flag. But Dr. Rosen suspects it's a ruse which leads him to take precipitous action.
An investigation leads Harken and Hicks to go undercover in a secret, underground Alphas-only Fight Club where they meet "Kat", an energetic fellow Alpha whose can instantly memorize any physical or mental skill.
The Team investigates an Alpha-related crime spree leading to one of their own, who is in the midst of a dangerous emotional breakdown. Our Team races to stop them before they hurt themself or someone else.
A powerful Alpha seems to have lost his mind and is attacking people at a hospital forcing, but as the team tracks him down they each begin to lose touch with reality. Guest stars Lauren Holly as "Senator Burton", Noah Reid as "Adam", Connor Price as "Jason Miller."
Rosen and his team travel to a remote village of Alphas to ask Skylar Adams to look into the function of the photo stimulator. But Parish has people in the village, and soon the lives of both Skylar and her daughter, Zoe, are in jeopardy.
When Jason Miller returns to school, he uses his newly-enhanced Alpha ability to form a neural network of classmates who bend to his will. Rosen begrudgingly agrees to team up with Stanton Parish to get Jason to release his mind slaves.
Kat goes undercover to investigate the source of a street drug that makes its user invincible, while Rosen works to confirm his suspicions about Dani's being an informant for Parish. Meanwhile, Hicks suspects that his son may be an Alpha.
It's Midnight Run, Alphas-style as Hicks and Kat transport a valuable Parish asset: a babbling, off-his-nuts memory sponge Alpha named Mitchell. Mitchell just might hold the strategic intel they need to stop Parish...if they can outrun and outwit Mitchell's seemingly indestructible Alpha "caretaker". Meawhile, Rosen is on his own hunt- for Parish' Achilles' Heel, a weak point to strike at. But Senator's Burton sudden presence in the Alphas office threatens to expose Rosen and Nina's own Achillles' Heel.