(at around 2 mins) In an early scene where Darry is speeding to catch up to an RV in front of them, we hear the car shifting gears about three times. However, when shots looking into the car at Darry driving are shown, it is his right hand on the wheel, while we still hear gears shifting. Unless there was a shifter by the door and near his left hand or he switched rapidly, this wouldn't be possible.
(at around 20 mins) When Darry slides down the pipe, he is encircled by light which would have had to been shining directly down the pipe. Seconds before he went in, he was staring into total blackness.
(at around 20 mins) When Darry slips into the pipe, he should have landed on the two "packages" that the Creeper already threw down the pipe. Instead he lands on bare ground, with no sign of the packages nearby.
(at around 58 mins) When Trish and Darry are in the car and they hit the Creeper, the windshield is shown to have been smashed, but in the shots taken from behind the car you can see the windshield's wiper marks.
(at around 31 mins) When Darry is in the pipe and Trish is keeping watch, notices headlights coming, and runs to the car, you can clearly see her trying to shift the shifter on the floor, but when the shot of her through the window comes up, you can see the real shift on the steering wheel. In the next shot it is gone.
(at around 33 mins) When the Jenners pull up to the diner, only the left side stop lights light up (red). When the Creeper attacks the police behind them later and they brake (at around 45 mins), both sides light up; the driver's-side stop lights light white and the passenger-side lights light red.
(at around 4 mins) At the beginning of the film, we see the Creeper zoom up behind Trish and Darry's car. As the scene progresses, Trish's hair goes from neat to very messy and back again several times.
(at around 31 mins) After Darry comes back from the pipe and has scared Trish, just before it cuts to the next scene there is a shot of Trish next to the window, on the window you can see spots of rain falling onto it. In the next shot while the two characters are driving away however, it is not raining, and the windows are completely dry.
(at around 3 mins) In the very beginning of the movie, when Darry first says the name 'Poli-Sci-Track-Team-Guy', and right before Trish tells him that her relationship is none of his business, Darry's facial expression changes quickly. When Darry says 'Poli-Sci-Track-Team-Guy', he is smiling. Then, it cuts to the side of Darry's face, and he is not smiling.
(at around 10 mins) As Patricia and Darry drive by the house and see the Creeper dumping bodies, as he tears out onto the road to chase them, you can clearly see a truck with its headlights on down the road behind the Creeper vehicle as it cuts across the grass to enter the road.
(at around 20 mins) After sliding down the pipe on his front side, Darry would not have landed on his back falling flatly as shown. He would have either landed on his chest, landed head first, or on his back rotating as he landed.
(at around 34 mins) When Darry and Trish drive up to the diner, there are only a couple of vehicles in the parking lot. When they get inside the diner is completely full, 30-40 people. However, since it's a small town, they could have walked or car-pooled.
Throughout the movie, Jeepers Creepers drives an enormous truck in which he chases potential victims, transports bodies, etc. So when he needs to fill up the gas tank, does he siphon the gas from his victims' cars or does he just use his Visa? Not to mention, his truck is in excellent mechanical condition which leads to 3 possible options. Jeepers Creepers is either a highly skilled mechanic in all aspects of automobiles, he has never been to the same mechanic twice, or his usual mechanic has some very heavy brass balls. On that note, how does he power the lights and music players in his house of pain? Is he on the grid; paying his utility bills, taxes, and everything else, or has he once again astounded us and managed to produce his own power for as long as he has been around killing stupid kids.
(at around 20 mins) When Darry falls down the pipe and lands in the circle of light, he is actually standing and stepping backwards, as evidenced by the bits of vegetation that are falling across his body, head to toes.